Browse of TCMCG019C28792 protein

CDS

Accession Number	TCMCG019C28792
gbkey	CDS
Protein Id	XP_022960522.1
Location	complement(join(2822634..2822884,2823301..2823430,2823824..2823923,2824016..2824095,2824267..2824404,2824481..2824767,2825116..2825278,2825913..2826014,2826116..2826318,2826399..2826577,2826664..2826755,2826902..2827031,2827122..2827672,2828058..2828252,2828425..2828508,2828633..2828701,2828922..2828996,2829091..2829144,2829247..2829349,2829540..2829633,2830139..2830985))
Gene	LOC111461234
GeneID	111461234
Organism	Cucurbita moschata

Protein

Length	1308aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA418582
db_source	XM_023104754.1
Definition	DNA mismatch repair protein MSH6 [Cucurbita moschata]

EGGNOG-MAPPER Annotation

COG_category	L
Description	Component of the post-replicative DNA mismatch repair system (MMR)
KEGG_TC	-
KEGG_Module	M00295        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K08737        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko01524        [VIEW IN KEGG] ko03430        [VIEW IN KEGG] ko05200        [VIEW IN KEGG] ko05210        [VIEW IN KEGG] map01524        [VIEW IN KEGG] map03430        [VIEW IN KEGG] map05200        [VIEW IN KEGG] map05210        [VIEW IN KEGG]
GOs	GO:0000217        [VIEW IN EMBL-EBI] GO:0000404        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003677        [VIEW IN EMBL-EBI] GO:0003684        [VIEW IN EMBL-EBI] GO:0003690        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006290        [VIEW IN EMBL-EBI] GO:0006298        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0008094        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016462        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016817        [VIEW IN EMBL-EBI] GO:0016818        [VIEW IN EMBL-EBI] GO:0016887        [VIEW IN EMBL-EBI] GO:0017111        [VIEW IN EMBL-EBI] GO:0030983        [VIEW IN EMBL-EBI] GO:0032135        [VIEW IN EMBL-EBI] GO:0032300        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0042623        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043570        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051276        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTCATCATCTCGTCGAACCAGCAATGGCCGATCGCCATTGGTAAACCAACAACGTCAAATCACTTCCTTCTTTACCAAGAAATCCACCGGAGAGAACTCTACCGATAAAACTAACCGTGATTCACATTTCAATTTGAGTCCGACTTCGAACCCTAGCCCTAGCACTAATTCTCCTTCTTCTGTACAGTCTAAGCGCAAGAAGACCCCGTTGGTCATCGGCGGCGGGGGCGGCGGTGCTGCATCTTCTTCTCCCGGTCCTTCTCCTATAGCTCATGTGAAGGAGAAGTCGTACGGGGATGGGGTTGTTGGGAAGAGAATTAAGGTTTATTGGCCGTTGGATAAGAGCTGGTACGAGGGTCGTGTGAAAATGTTCGATGAGAAGGATGGGAAACATCTGGTGCAGTATGACGATGCGGAGGAGGAGTCACTGGTGTTGGGGAATGAGAAGATCGAGTGGGTTGAGGAAAGTGAGAAGAAGTTAAAACGATTGCGACGGGGTTCTTCATCGCCGATGAATGCGGCGGTGGTAGAAGATATCGAGGAGGATTTGAACGATGGAGACGCCAGCGATGATTCTAGAGATGAAGATTGGGGGAAGGGAAAAAATGTGGAGAATGAGGTGAGTGATGAGGATGATTTGGGGTTGGTGGAGGAAGATGAAGAAGATGAGAATGAGGACGATGGAGTGGGCAAGTCAAGAAGAAAGCAAGGTGGGAATTTGGAATCCAAGAAGCGTAAGATAAGCAATGGCGAGAAAGTGGTAGGAGCTCCAAAGAAAAGCAAGAGTAGCGGTGGAAACTTGCCTTCTGGGCTATCTTCAGTGGAGCCTAAGATCAAATCCGATAGGGTGAATGTCTTGAATGGAATGAATGAAATTGCGAACGATGCTTTAGAAAGGTTCAACACGCGAGAAGCTGAAAAGTTCCGATTTCTAAAGGCAGACAGGAAGGATGCAAACAAAAGACATCCAGGAGATCCTGATTATGATCCAAGAACTTTGTATTTGCCTCCTCATTTCTTGAAGAATTTATCAGATGGTCAGAGACAATGGTGGGAGTTTAAGTCAAAGCACATGGATAAAGTTCTGTTTTTCAAGATGGGGAAATTTTATGAACTTTTCGAAATGGATGCACACGTAGGAGCTAAGGAGCTTGATTTGCAATATATGAAGGGAGAACAACCTCACTGTGGCTTCCCTGAGAAGAACTTTTCAATGAATGTGGAGAAGTTGGCAAGGAAGGGTTATCGAGTTCTTGTTATAGAGCAGACAGAAACTCCTGAACAGTTAGAGAAAAGACGAAAGGAGAAAGGTTCTAAGGATAAGGTTGTGAAACGTGAAATATGTGCAGTAGTCACAAAAGGAACACTAACTGAGGGTGAGATGCTATCTTTGAATCCTGATGCTTCATATCTCATGGCAGTAACTGAAAAATTCCATGGCTTGGAAAACCAGCCAGCAGAACGGATTTTAGGGGTTTGTGTGGTTGATGTGGCCACCAGTAGGATTATCCTTGGGCAGTTTGGTGATGATGCGGAGTGCAGTGCTCTGTGCTGTCTTTTGTCCGAGCTTAGGCCAGTTGAAATTATCAAACCTTCTAAACTGCTAAGTCCTGAAACGGAGAGGGTGCTACTCACTCATACGAGAAATCCTTTAGTGAATGAGTTAGTTCCATTATTGGAATTCTGGGATGCTGAAAAAAGTGTTCACGAAGTCAAGAGATTGTTTAAGGGCATTGCTAATCGATCATTCCTTGGATCGTCTAATGAAGAAAGTTTACTCAATGATGATGTTCCTGGAGAAAAAGATGGGTTGGGCTACTTGCCAGATGTTTTATCTGAACTAATTAATGCACGTGAAAATGGGTCTTGGGCACTTTCAGCTCTTGGAGGAATCCTTTTCTATTTGAAGCAGGCTTTCCTGGATGAGGCATTGCTTAGATTTGCGAAGTTTGAATTACTTCCTTGTTCTGGCTTCAATGATGTTATTTCAAAACCCTATATGGTTCTTGATGCAGCTGCCTTGGAGAATCTGGAGATCTTTGAGAACAGTAGAAATGGGGGCTCTTCTGGGACGCTCTATTCACAACTGAACCACTGTGTAACTGCATTTGGGAAAAGGTTACTTAAGACATGGCTTGCAAGACCTTTATATCACGTAGAATCAATTAAAGCTAGGCAAGGTGCTGTGGCGAGCCTACGGGGGGATAACTTATCTTATTCTCTTGAGTTTCGGAAAGCATTATCCAAACTCACAGATATGGAGCGTTTACTTGCTCGCATTTTTGCTAGTAGTGAGGCAAATGGGAGGAATGCAACAAATGTGGTTCTATATGAGGATGCAGCAAAAAGACAACTTCAAGAGTTTATATCTGCTTTGCGTGGTTGTGAGCTCATGCTCCAAGCATGTTCATCGCTTCGTGTCATTTTGGAAAATGTTGAATCAAGACGACTTGATTGCCTATTAACACCTGGTGAAGGTCTTCCTGATCTCCAGTCAGTTCTTAGTCATTTCAAGGATGCTTTTGATTGGGGTGAAGCCAATAGTTCGGGACGTATAATTCCTCATGAAGGTGTAGATGTGGAGTACGACTCTGCTTGTAAAAAAATCAAGGAGATACAATCTGACTTGACAAAGCATTTAAAGGAACAGAGGAAATTACTTGGGGATACATCAATCACTTATGTGACAGTAGGAAAAGAGACTCATTTGTTGGAAGTGCCTGAAAGTTTGCAGGGTAGCATTCCTCAGAATTATGAGTTGCGATCTTCTAAAAAGGGCTTCTTCCGGTACTGGACTCCTAATATTAAGAAGTTGTTAGCTGAGCTTTCTCTAGCTGAATCTGAGAAGGAGTCCTCGCTGAAAAGCATTTTGCAGAGGTTAATTGGGAAATTCTGTGAACATCATCTCCAGTGGAGGCAATTAGTCTCTGCAGTTGCTGAACTTGATGTTCTGATCAGCCTAGCAATTGCAAGTGATTATTATGAGGGTGGCGCATGTCAACCACTTTTCTCAAAGTCACAGTGTCAAAAGGAAGTGCCACGTTTTTCTGCAAAAAACTTGGGGCATCCTATTCTTAAAAGTGATTCGTTGGGTGAGGGTACATTTGTCCCCAATGACATCAATATTGGTGGCTCAAGTGCCAGCTTCATTCTTCTGACTGGCCCAAACATGGGTGGAAAATCGACTCTTCTTCGGCAAGTTTGTTTGTCCGTCGTTCTGGCTCAGATAGGTGCAGATGTTCCTGCAGAAAGTTTTGAGTTAGCTCCTGTTGATCGAATATTCGTTCGGATGGGTGCTAAGGATCAGATTATGTCTGGTCAAAGTACATTTTTGACAGAACTATCAGAAACTGCGCTGATGTTGTCATCAGCTACCCGTAATTCATTGGTGATATTGGACGAACTTGGACGTGGGACAGCAACTTCAGATGGACAGGCAATTGCTGAATCAGTTCTTGAACATTTTGTTAGCAAGGTGCAATGCAGGGGAGTATTTTCAACTCATTATCACCGATTAGCCTTGGCTTATTGTAAAGATCCTAGGGTTTCATTGTACCATATGGCATGCCGAGTTGGAGAGGGGACTGGGGGCGTAGAAGAAGTTACATTTCTCTATCGTTTGACTTCTGGCACGTGTCCGAAAAGTTATGGAGTGAATGTTGCACGGTTAGCTGGACTCCCAAATTGTGTATTGACCGAGGCTGCGGCTAAATCAAGGGAGTTTGAAGCTACTTATGGTATTACTGGAGAAGAATCTGAAGAAAACTTGTGCAATCATTCATGGGTAGATGGTACAGTGACTTTGATTCAAAAGTTGATCAGCCTGGAATCAACCCTGAGATGCAACGATGAAACGGAGAAGAATGGTATCAGTTCCTTGAAACAGCTTCAGCAACAAGCAAGAATACTTGTCCAGCAAGGTTGA

Protein:   MSSSRRTSNGRSPLVNQQRQITSFFTKKSTGENSTDKTNRDSHFNLSPTSNPSPSTNSPSSVQSKRKKTPLVIGGGGGGAASSSPGPSPIAHVKEKSYGDGVVGKRIKVYWPLDKSWYEGRVKMFDEKDGKHLVQYDDAEEESLVLGNEKIEWVEESEKKLKRLRRGSSSPMNAAVVEDIEEDLNDGDASDDSRDEDWGKGKNVENEVSDEDDLGLVEEDEEDENEDDGVGKSRRKQGGNLESKKRKISNGEKVVGAPKKSKSSGGNLPSGLSSVEPKIKSDRVNVLNGMNEIANDALERFNTREAEKFRFLKADRKDANKRHPGDPDYDPRTLYLPPHFLKNLSDGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRVLVIEQTETPEQLEKRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTEKFHGLENQPAERILGVCVVDVATSRIILGQFGDDAECSALCCLLSELRPVEIIKPSKLLSPETERVLLTHTRNPLVNELVPLLEFWDAEKSVHEVKRLFKGIANRSFLGSSNEESLLNDDVPGEKDGLGYLPDVLSELINARENGSWALSALGGILFYLKQAFLDEALLRFAKFELLPCSGFNDVISKPYMVLDAAALENLEIFENSRNGGSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHVESIKARQGAVASLRGDNLSYSLEFRKALSKLTDMERLLARIFASSEANGRNATNVVLYEDAAKRQLQEFISALRGCELMLQACSSLRVILENVESRRLDCLLTPGEGLPDLQSVLSHFKDAFDWGEANSSGRIIPHEGVDVEYDSACKKIKEIQSDLTKHLKEQRKLLGDTSITYVTVGKETHLLEVPESLQGSIPQNYELRSSKKGFFRYWTPNIKKLLAELSLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAVAELDVLISLAIASDYYEGGACQPLFSKSQCQKEVPRFSAKNLGHPILKSDSLGEGTFVPNDINIGGSSASFILLTGPNMGGKSTLLRQVCLSVVLAQIGADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYCKDPRVSLYHMACRVGEGTGGVEEVTFLYRLTSGTCPKSYGVNVARLAGLPNCVLTEAAAKSREFEATYGITGEESEENLCNHSWVDGTVTLIQKLISLESTLRCNDETEKNGISSLKQLQQQARILVQQG